MK002673 K0117

Resource Type: 
Genetic Marker
Name: 
MK002673 K0117
Identifier: 
MK002673_K0117
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002673 K0117, is adjacent to primer, K0117_X.
The genetic_marker, MK002673 K0117, is adjacent to primer, K0117_Y.
The genetic_marker, MK002673 K0117, is adjacent to primer, K0117_Common.
The genetic_marker, MK002673 K0117, is adjacent to gene, DCAR_026879.
The genetic_marker, MK002673 K0117, is located in gene, LOC108199895.
The marker_locus, K0117, is an instance of genetic_marker, MK002673 K0117.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr89.324K0117MapViewer
2016 70796 NG full mapChr89.324K0117MapViewer
2016 Integ NG full mapCH857.09K0117MapViewer
Synonyms: 
  • MK002673
Sequence Coordinates: 
DCARv2_Chr8:27974574..27974624+
View location in JBrowse: 
DCARv2_Chr8:27974574..27974624+
Sequence: 
ACATTTTCTGTCTAGAACAGTTCAATCACCTCTGAGCKGAAGTTTGTGGC
ATAGAATATGCCATGGTACCC
Sequences: 
>MK002673_K0117 ID=MK002673_K0117; Name=MK002673 K0117; organism=Daucus carota; type=genetic_marker
ACATTTTCTGTCTAGAACAGTTCAATCACCTCTGAGCKGAAGTTTGTGGC
ATAGAATATGCCATGGTACCC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ACATTTTCTGTCTAGAACAGTTCAATCACCTCTGAGC
Three Prime Flanking Region: 
GAAGTTTGTGGCATAGAATATGCCATGGTACCC
SNP: 
G/T