MK002721 K0165

Resource Type: 
Genetic Marker
Name: 
MK002721 K0165
Identifier: 
MK002721_K0165
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002721 K0165, is adjacent to primer, K0165_X.
The genetic_marker, MK002721 K0165, is adjacent to primer, K0165_Y.
The genetic_marker, MK002721 K0165, is adjacent to primer, K0165_Common.
The genetic_marker, MK002721 K0165, is located in gene, DCAR_017536.
The genetic_marker, MK002721 K0165, is located in gene, LOC108220105.
The marker_locus, K0165, is an instance of genetic_marker, MK002721 K0165.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr527.381K0165MapViewer
2016 70796 NG bin mapChr527.381K0165MapViewer
2016 Integ NG bin mapCH540.771K0165MapViewer
2016 Integ NG full mapCH541.136K0165MapViewer
Synonyms: 
  • MK002721
Sequence Coordinates: 
DCARv2_Chr5:20669128..20669176-
View location in JBrowse: 
DCARv2_Chr5:20669128..20669176-
Sequence: 
AACCCTGTCTATGAAATCCAATGCCTCCACAGTTATCYTGTTGGCGGTTA
GGAAGTAAGCACAAAACAACA
Sequences: 
>MK002721_K0165 ID=MK002721_K0165; Name=MK002721 K0165; organism=Daucus carota; type=genetic_marker
AACCCTGTCTATGAAATCCAATGCCTCCACAGTTATCYTGTTGGCGGTTA
GGAAGTAAGCACAAAACAACA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AACCCTGTCTATGAAATCCAATGCCTCCACAGTTATC
Three Prime Flanking Region: 
TGTTGGCGGTTAGGAAGTAAGCACAAAACAACA
SNP: 
C/T