MK002857 K0301

Resource Type: 
Genetic Marker
Name: 
MK002857 K0301
Identifier: 
MK002857_K0301
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002857 K0301, is adjacent to primer, K0301_X.
The genetic_marker, MK002857 K0301, is adjacent to primer, K0301_Y.
The genetic_marker, MK002857 K0301, is adjacent to primer, K0301_Common.
The genetic_marker, MK002857 K0301, is adjacent to gene, DCAR_029300.
The genetic_marker, MK002857 K0301, is adjacent to gene, LOC108200754.
The marker_locus, K0301, is an instance of genetic_marker, MK002857 K0301.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr910.339K0301MapViewer
2016 70796 NG bin mapChr910.339K0301MapViewer
2016 Integ NG full mapCH99.005K0301MapViewer
Synonyms: 
  • MK002857
Sequence Coordinates: 
DCARv2_Chr9:4502744..4512430+
View location in JBrowse: 
DCARv2_Chr9:4502744..4512430+
Sequence: 
GCAATCTCTTCTACAATCCAGTGCCCAAGTCATCAGARATGATGTCTGAA
TTGATAGCTTCTTCACCCGMG
Sequences: 
>MK002857_K0301 ID=MK002857_K0301; Name=MK002857 K0301; organism=Daucus carota; type=genetic_marker
GCAATCTCTTCTACAATCCAGTGCCCAAGTCATCAGARATGATGTCTGAA
TTGATAGCTTCTTCACCCGMG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCAATCTCTTCTACAATCCAGTGCCCAAGTCATCAGA
Three Prime Flanking Region: 
ATGATGTCTGAATTGATAGCTTCTTCACCCGMG
SNP: 
A/G