MK003372 K0816

Resource Type: 
Genetic Marker
Name: 
MK003372 K0816
Identifier: 
MK003372_K0816
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003372 K0816, is adjacent to primer, K0816_X.
The genetic_marker, MK003372 K0816, is adjacent to primer, K0816_Y.
The genetic_marker, MK003372 K0816, is adjacent to primer, K0816_Common.
The genetic_marker, MK003372 K0816, is located in gene, DCAR_020991.
The genetic_marker, MK003372 K0816, is located in gene, LOC108227654.
The marker_locus, K0816, is an instance of genetic_marker, MK003372 K0816.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr68.018K0816MapViewer
2016 70796 NG full mapChr652.908K0816MapViewer
2016 Integ NG full mapCH658.376K0816MapViewer
Synonyms: 
  • MK003372
Sequence Coordinates: 
DCARv2_Chr6:26767695..26767745+
View location in JBrowse: 
DCARv2_Chr6:26767695..26767745+
Sequence: 
GCTGAAACTGAAAGAGTGGTAAAACCACAACAGAAACMGCTGAAGGAAGA
TTCCAATACTTCAATCAACCA
Sequences: 
>MK003372_K0816 ID=MK003372_K0816; Name=MK003372 K0816; organism=Daucus carota; type=genetic_marker
GCTGAAACTGAAAGAGTGGTAAAACCACAACAGAAACMGCTGAAGGAAGA
TTCCAATACTTCAATCAACCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCTGAAACTGAAAGAGTGGTAAAACCACAACAGAAAC
Three Prime Flanking Region: 
GCTGAAGGAAGATTCCAATACTTCAATCAACCA
SNP: 
A/C