MK003395 K0839

Resource Type: 
Genetic Marker
Name: 
MK003395 K0839
Identifier: 
MK003395_K0839
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003395 K0839, is adjacent to primer, K0839_X.
The genetic_marker, MK003395 K0839, is adjacent to primer, K0839_Y.
The genetic_marker, MK003395 K0839, is adjacent to primer, K0839_Common.
The genetic_marker, MK003395 K0839, is located in gene, DCAR_027872.
The genetic_marker, MK003395 K0839, is located in gene, LOC108199412.
The marker_locus, K0839, is an instance of genetic_marker, MK003395 K0839.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH845.818K0839MapViewer
2016 70796 NG full mapChr820.609K0839MapViewer
2016 Integ NG bin mapCH840.272K0839MapViewer
2016 70796 NG bin mapChr820.609K0839MapViewer
Synonyms: 
  • MK003395
Sequence Coordinates: 
DCARv2_Chr8:17958920..17958971+
View location in JBrowse: 
DCARv2_Chr8:17958920..17958971+
Sequence: 
CTCTCGGRACCCAACCAATTACCCTACGAACTTTCTCMTCGAAGAGTACT
ACACATGTTTTTGCTGCCTCA
Sequences: 
>MK003395_K0839 ID=MK003395_K0839; Name=MK003395 K0839; organism=Daucus carota; type=genetic_marker
CTCTCGGRACCCAACCAATTACCCTACGAACTTTCTCMTCGAAGAGTACT
ACACATGTTTTTGCTGCCTCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTCTCGGRACCCAACCAATTACCCTACGAACTTTCTC
Three Prime Flanking Region: 
TCGAAGAGTACTACACATGTTTTTGCTGCCTCA
SNP: 
A/C