MK003416 K0860

Resource Type: 
Genetic Marker
Name: 
MK003416 K0860
Identifier: 
MK003416_K0860
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003416 K0860, is adjacent to primer, K0860_X.
The genetic_marker, MK003416 K0860, is adjacent to primer, K0860_Y.
The genetic_marker, MK003416 K0860, is adjacent to primer, K0860_Common.
The genetic_marker, MK003416 K0860, is located in gene, DCAR_016276.
The genetic_marker, MK003416 K0860, is located in gene, LOC108220154.
The marker_locus, K0860, is an instance of genetic_marker, MK003416 K0860.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr567.653K0860MapViewer
2016 Integ NG full mapCH57.353K0860MapViewer
Synonyms: 
  • MK003416
Sequence Coordinates: 
DCARv2_Chr5:1857536..1857586-
View location in JBrowse: 
DCARv2_Chr5:1857536..1857586-
Sequence: 
TCTCCTCAGTAACAAAATCATCTCGCGGTCCAATTTCYAACTCTTCAGGC
GGATTGTAGAACATGGCAACA
Sequences: 
>MK003416_K0860 ID=MK003416_K0860; Name=MK003416 K0860; organism=Daucus carota; type=genetic_marker
TCTCCTCAGTAACAAAATCATCTCGCGGTCCAATTTCYAACTCTTCAGGC
GGATTGTAGAACATGGCAACA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCTCCTCAGTAACAAAATCATCTCGCGGTCCAATTTC
Three Prime Flanking Region: 
AACTCTTCAGGCGGATTGTAGAACATGGCAACA
SNP: 
C/T