MK003540 K0984

Resource Type: 
Genetic Marker
Name: 
MK003540 K0984
Identifier: 
MK003540_K0984
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003540 K0984, is adjacent to primer, K0984_X.
The genetic_marker, MK003540 K0984, is adjacent to primer, K0984_Y.
The genetic_marker, MK003540 K0984, is adjacent to primer, K0984_Common.
The genetic_marker, MK003540 K0984, is located in gene, DCAR_020757.
The genetic_marker, MK003540 K0984, is located in gene, LOC108224307.
The marker_locus, K0984, is an instance of genetic_marker, MK003540 K0984.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr653.751K0984MapViewer
2016 Integ NG full mapCH659.42K0984MapViewer
Synonyms: 
  • MK003540
Sequence Coordinates: 
DCARv2_Chr6:28605467..28605511-
View location in JBrowse: 
DCARv2_Chr6:28605467..28605511-
Sequence: 
GCAGAAGAAGGAAACCACTTCTGGGTGTTCCACCAGTRAGTTAGCCATGG
AAGGTAGTGAGCAACACGTAA
Sequences: 
>MK003540_K0984 ID=MK003540_K0984; Name=MK003540 K0984; organism=Daucus carota; type=genetic_marker
GCAGAAGAAGGAAACCACTTCTGGGTGTTCCACCAGTRAGTTAGCCATGG
AAGGTAGTGAGCAACACGTAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCAGAAGAAGGAAACCACTTCTGGGTGTTCCACCAGT
Three Prime Flanking Region: 
AGTTAGCCATGGAAGGTAGTGAGCAACACGTAA
SNP: 
A/G