MK003557 K1001

Resource Type: 
Genetic Marker
Name: 
MK003557 K1001
Identifier: 
MK003557_K1001
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003557 K1001, is adjacent to primer, K1001_X.
The genetic_marker, MK003557 K1001, is adjacent to primer, K1001_Y.
The genetic_marker, MK003557 K1001, is adjacent to primer, K1001_Common.
The genetic_marker, MK003557 K1001, is located in gene, DCAR_021723.
The genetic_marker, MK003557 K1001, is located in gene, LOC108228188.
The marker_locus, K1001, is an instance of genetic_marker, MK003557 K1001.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH652.761K1001MapViewer
2016 Integ NG full mapCH656.233K1001MapViewer
2016 70796 NG full mapChr650.414K1001MapViewer
2016 80592 NG bin mapChr69.453K1001MapViewer
2016 80592 NG full mapChr69.453K1001MapViewer
Synonyms: 
  • MK003557
Sequence Coordinates: 
DCARv2_Chr6:20360265..20360322-
View location in JBrowse: 
DCARv2_Chr6:20360265..20360322-
Sequence: 
AATAAGGATGAGGGAGTCGATTTCCTGAGAGAGAAGARGGCTTGTAGCTC
ACTGAAGGCAGAGAATTAACT
Sequences: 
>MK003557_K1001 ID=MK003557_K1001; Name=MK003557 K1001; organism=Daucus carota; type=genetic_marker
AATAAGGATGAGGGAGTCGATTTCCTGAGAGAGAAGARGGCTTGTAGCTC
ACTGAAGGCAGAGAATTAACT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AATAAGGATGAGGGAGTCGATTTCCTGAGAGAGAAGA
Three Prime Flanking Region: 
GGCTTGTAGCTCACTGAAGGCAGAGAATTAACT
SNP: 
A/G