MK003645 K1089

Resource Type: 
Genetic Marker
Name: 
MK003645 K1089
Identifier: 
MK003645_K1089
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003645 K1089, is adjacent to primer, K1089_X.
The genetic_marker, MK003645 K1089, is adjacent to primer, K1089_Y.
The genetic_marker, MK003645 K1089, is adjacent to primer, K1089_Common.
The genetic_marker, MK003645 K1089, is located in gene, DCAR_021401.
The genetic_marker, MK003645 K1089, is located in gene, LOC108224551.
The marker_locus, K1089, is an instance of genetic_marker, MK003645 K1089.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr651.89K1089MapViewer
2016 80592 NG full mapChr68.969K1089MapViewer
2016 Integ NG full mapCH657.247K1089MapViewer
Synonyms: 
  • MK003645
Sequence Coordinates: 
DCARv2_Chr6:23444550..23444590-
View location in JBrowse: 
DCARv2_Chr6:23444550..23444590-
Sequence: 
AGTAATGGGAGTTGCTGGGTTGCAGCATAAGCAGGTTRTAGTCTCTGCTG
GTGCAGACAAGAGGATTATAG
Sequences: 
>MK003645_K1089 ID=MK003645_K1089; Name=MK003645 K1089; organism=Daucus carota; type=genetic_marker
AGTAATGGGAGTTGCTGGGTTGCAGCATAAGCAGGTTRTAGTCTCTGCTG
GTGCAGACAAGAGGATTATAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTAATGGGAGTTGCTGGGTTGCAGCATAAGCAGGTT
Three Prime Flanking Region: 
TAGTCTCTGCTGGTGCAGACAAGAGGATTATAG
SNP: 
A/G