MK003952 K1396

Resource Type: 
Genetic Marker
Name: 
MK003952 K1396
Identifier: 
MK003952_K1396
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK003952 K1396, is adjacent to primer, K1396_X.
The genetic_marker, MK003952 K1396, is adjacent to primer, K1396_Y.
The genetic_marker, MK003952 K1396, is adjacent to primer, K1396_Common.
The genetic_marker, MK003952 K1396, is located in gene, LOC108199682.
The marker_locus, K1396, is an instance of genetic_marker, MK003952 K1396.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr816.077K1396MapViewer
2016 Integ NG full mapCH850.486K1396MapViewer
2016 Integ NG bin mapCH844.787K1396MapViewer
2016 70796 NG full mapChr816.077K1396MapViewer
Synonyms: 
  • MK003952
Sequence Coordinates: 
DCARv2_Chr8:23576762..23576809-
View location in JBrowse: 
DCARv2_Chr8:23576762..23576809-
Sequence: 
ATCTTAAGATGGCAACGAGGAATTTTAGGCCTGATAGYCTTCTTGGTGAA
GGGGGATTTGGTTGTGTATTC
Sequences: 
>MK003952_K1396 ID=MK003952_K1396; Name=MK003952 K1396; organism=Daucus carota; type=genetic_marker
ATCTTAAGATGGCAACGAGGAATTTTAGGCCTGATAGYCTTCTTGGTGAA
GGGGGATTTGGTTGTGTATTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATCTTAAGATGGCAACGAGGAATTTTAGGCCTGATAG
Three Prime Flanking Region: 
CTTCTTGGTGAAGGGGGATTTGGTTGTGTATTC
SNP: 
C/T