MK004032 K1476

Resource Type: 
Genetic Marker
Name: 
MK004032 K1476
Identifier: 
MK004032_K1476
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004032 K1476, is adjacent to primer, K1476_X.
The genetic_marker, MK004032 K1476, is adjacent to primer, K1476_Y.
The genetic_marker, MK004032 K1476, is adjacent to primer, K1476_Common.
The genetic_marker, MK004032 K1476, is located in gene, DCAR_016330.
The genetic_marker, MK004032 K1476, is located in gene, LOC108223090.
The marker_locus, K1476, is an instance of genetic_marker, MK004032 K1476.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr566.592K1476MapViewer
2016 Integ NG full mapCH58.529K1476MapViewer
2016 Integ NG bin mapCH56.923K1476MapViewer
2016 70796 NG bin mapChr566.592K1476MapViewer
Synonyms: 
  • MK004032
Sequence Coordinates: 
DCARv2_Chr5:2261871..2261917-
View location in JBrowse: 
DCARv2_Chr5:2261871..2261917-
Sequence: 
TTGGAGCCTCCCATTCACCATCCTCCTCATCATCCCARTCTTCAGGTTTG
GATGCCTCGGGATCTTCAATT
Sequences: 
>MK004032_K1476 ID=MK004032_K1476; Name=MK004032 K1476; organism=Daucus carota; type=genetic_marker
TTGGAGCCTCCCATTCACCATCCTCCTCATCATCCCARTCTTCAGGTTTG
GATGCCTCGGGATCTTCAATT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTGGAGCCTCCCATTCACCATCCTCCTCATCATCCCA
Three Prime Flanking Region: 
TCTTCAGGTTTGGATGCCTCGGGATCTTCAATT
SNP: 
A/G