MK004042 K1486

Resource Type: 
Genetic Marker
Name: 
MK004042 K1486
Identifier: 
MK004042_K1486
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004042 K1486, is adjacent to primer, K1486_X.
The genetic_marker, MK004042 K1486, is adjacent to primer, K1486_Y.
The genetic_marker, MK004042 K1486, is adjacent to primer, K1486_Common.
The genetic_marker, MK004042 K1486, is located in gene, DCAR_022438.
The genetic_marker, MK004042 K1486, is located in gene, LOC108227236.
The marker_locus, K1486, is an instance of genetic_marker, MK004042 K1486.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH651.023K1486MapViewer
2016 70796 NG full mapChr645.414K1486MapViewer
Synonyms: 
  • MK004042
Sequence Coordinates: 
DCARv2_Chr6:12424569..12424633+
View location in JBrowse: 
DCARv2_Chr6:12424569..12424633+
Sequence: 
AAGCAGTTAGTGCTGACTATCAGAATCAACCTAAAGCYGGTCTTCCAGAA
AAATCATCTGAAATGCAATGG
Sequences: 
>MK004042_K1486 ID=MK004042_K1486; Name=MK004042 K1486; organism=Daucus carota; type=genetic_marker
AAGCAGTTAGTGCTGACTATCAGAATCAACCTAAAGCYGGTCTTCCAGAA
AAATCATCTGAAATGCAATGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGCAGTTAGTGCTGACTATCAGAATCAACCTAAAGC
Three Prime Flanking Region: 
GGTCTTCCAGAAAAATCATCTGAAATGCAATGG
SNP: 
C/T