MK004075 K1519

Resource Type: 
Genetic Marker
Name: 
MK004075 K1519
Identifier: 
MK004075_K1519
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004075 K1519, is adjacent to primer, K1519_X.
The genetic_marker, MK004075 K1519, is adjacent to primer, K1519_Y.
The genetic_marker, MK004075 K1519, is adjacent to primer, K1519_Common.
The genetic_marker, MK004075 K1519, is located in gene, DCAR_027450.
The genetic_marker, MK004075 K1519, is located in gene, LOC108199839.
The marker_locus, K1519, is an instance of genetic_marker, MK004075 K1519.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH849.715K1519MapViewer
2016 70796 NG full mapChr816.841K1519MapViewer
2016 Integ NG bin mapCH843.997K1519MapViewer
2016 70796 NG bin mapChr816.841K1519MapViewer
Synonyms: 
  • MK004075
Sequence Coordinates: 
DCARv2_Chr8:22945883..22945934-
View location in JBrowse: 
DCARv2_Chr8:22945883..22945934-
Sequence: 
AAAATAATGAGCTTATGGATTCACCCACAAAAGACAGRACTAGGGAGTTG
CCAGCTGAAGAAAAWCACCCA
Sequences: 
>MK004075_K1519 ID=MK004075_K1519; Name=MK004075 K1519; organism=Daucus carota; type=genetic_marker
AAAATAATGAGCTTATGGATTCACCCACAAAAGACAGRACTAGGGAGTTG
CCAGCTGAAGAAAAWCACCCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAATAATGAGCTTATGGATTCACCCACAAAAGACAG
Three Prime Flanking Region: 
ACTAGGGAGTTGCCAGCTGAAGAAAAWCACCCA
SNP: 
A/G