MK004083 K1527

Resource Type: 
Genetic Marker
Name: 
MK004083 K1527
Identifier: 
MK004083_K1527
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004083 K1527, is adjacent to primer, K1527_X.
The genetic_marker, MK004083 K1527, is adjacent to primer, K1527_Y.
The genetic_marker, MK004083 K1527, is adjacent to primer, K1527_Common.
The genetic_marker, MK004083 K1527, is located in gene, DCAR_022946.
The genetic_marker, MK004083 K1527, is located in gene, LOC108192791.
The marker_locus, K1527, is an instance of genetic_marker, MK004083 K1527.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH618.881K1527MapViewer
2016 80592 NG full mapChr645.76K1527MapViewer
2016 80592 NG bin mapChr645.76K1527MapViewer
2016 70796 NG full mapChr65.785K1527MapViewer
2016 Integ NG full mapCH618.425K1527MapViewer
Synonyms: 
  • MK004083
Sequence Coordinates: 
DCARv2_Chr6:3409694..3409744-
View location in JBrowse: 
DCARv2_Chr6:3409694..3409744-
Sequence: 
GGAGGAAGTTCCACGAAGAGAAGGACATTGACTCGATYAATGACCGGAAT
GAGCACTTTAATAAGAAGATC
Sequences: 
>MK004083_K1527 ID=MK004083_K1527; Name=MK004083 K1527; organism=Daucus carota; type=genetic_marker
GGAGGAAGTTCCACGAAGAGAAGGACATTGACTCGATYAATGACCGGAAT
GAGCACTTTAATAAGAAGATC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGAGGAAGTTCCACGAAGAGAAGGACATTGACTCGAT
Three Prime Flanking Region: 
AATGACCGGAATGAGCACTTTAATAAGAAGATC
SNP: 
C/T