MK004089 K1533

Resource Type: 
Genetic Marker
Name: 
MK004089 K1533
Identifier: 
MK004089_K1533
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004089 K1533, is adjacent to primer, K1533_X.
The genetic_marker, MK004089 K1533, is adjacent to primer, K1533_Y.
The genetic_marker, MK004089 K1533, is adjacent to primer, K1533_Common.
The genetic_marker, MK004089 K1533, is located in gene, DCAR_017773.
The genetic_marker, MK004089 K1533, is located in gene, LOC108223589.
The marker_locus, K1533, is an instance of genetic_marker, MK004089 K1533.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr523.966K1533MapViewer
2016 Integ NG full mapCH544.349K1533MapViewer
2016 Integ NG bin mapCH543.742K1533MapViewer
2016 70796 NG bin mapChr523.966K1533MapViewer
Synonyms: 
  • MK004089
Sequence Coordinates: 
DCARv2_Chr5:23280122..23280171+
View location in JBrowse: 
DCARv2_Chr5:23280122..23280171+
Sequence: 
AAGATGGCATTTCAGTTGGCAAGAGATTAAAGTTCGTRATCAATGGTGGC
CGAATGGGTGGTCTTGGACAG
Sequences: 
>MK004089_K1533 ID=MK004089_K1533; Name=MK004089 K1533; organism=Daucus carota; type=genetic_marker
AAGATGGCATTTCAGTTGGCAAGAGATTAAAGTTCGTRATCAATGGTGGC
CGAATGGGTGGTCTTGGACAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGATGGCATTTCAGTTGGCAAGAGATTAAAGTTCGT
Three Prime Flanking Region: 
ATCAATGGTGGCCGAATGGGTGGTCTTGGACAG
SNP: 
A/G