MK004104 K1548

Resource Type: 
Genetic Marker
Name: 
MK004104 K1548
Identifier: 
MK004104_K1548
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004104 K1548, is adjacent to primer, K1548_X.
The genetic_marker, MK004104 K1548, is adjacent to primer, K1548_Y.
The genetic_marker, MK004104 K1548, is adjacent to primer, K1548_Common.
The genetic_marker, MK004104 K1548, is adjacent to gene, DCAR_018915.
The genetic_marker, MK004104 K1548, is located in gene, LOC108219775.
The marker_locus, K1548, is an instance of genetic_marker, MK004104 K1548.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr514.035K1548MapViewer
2016 Integ NG full mapCH553.55K1548MapViewer
Synonyms: 
  • MK004104
Sequence Coordinates: 
DCARv2_Chr5:34443291..34443364+
View location in JBrowse: 
DCARv2_Chr5:34443291..34443364+
Sequence: 
GTTCTCTCCCAATCTCTCTCTCTCTCCCGCACACACARATATCTACATAC
TAATGGGCTTGAAAGAKAAAA
Sequences: 
>MK004104_K1548 ID=MK004104_K1548; Name=MK004104 K1548; organism=Daucus carota; type=genetic_marker
GTTCTCTCCCAATCTCTCTCTCTCTCCCGCACACACARATATCTACATAC
TAATGGGCTTGAAAGAKAAAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTTCTCTCCCAATCTCTCTCTCTCTCCCGCACACACA
Three Prime Flanking Region: 
ATATCTACATACTAATGGGCTTGAAAGAKAAAA
SNP: 
A/G