MK004122 K1566

Resource Type: 
Genetic Marker
Name: 
MK004122 K1566
Identifier: 
MK004122_K1566
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004122 K1566, is adjacent to primer, K1566_X.
The genetic_marker, MK004122 K1566, is adjacent to primer, K1566_Y.
The genetic_marker, MK004122 K1566, is adjacent to primer, K1566_Common.
The genetic_marker, MK004122 K1566, is located in gene, DCAR_022829.
The genetic_marker, MK004122 K1566, is located in gene, LOC108227320.
The marker_locus, K1566, is an instance of genetic_marker, MK004122 K1566.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH626.077K1566MapViewer
2016 70796 NG bin mapChr616.966K1566MapViewer
2016 Integ NG full mapCH627.403K1566MapViewer
2016 70796 NG full mapChr616.966K1566MapViewer
Synonyms: 
  • MK004122
Sequence Coordinates: 
DCARv2_Chr6:5216361..5216419-
View location in JBrowse: 
DCARv2_Chr6:5216361..5216419-
Sequence: 
AATTGCTTGACCTATTTAATTGTGGAGGTATCACCCCWATTTCATTCCGG
TGGTTAAAGAAACCTTATTTC
Sequences: 
>MK004122_K1566 ID=MK004122_K1566; Name=MK004122 K1566; organism=Daucus carota; type=genetic_marker
AATTGCTTGACCTATTTAATTGTGGAGGTATCACCCCWATTTCATTCCGG
TGGTTAAAGAAACCTTATTTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AATTGCTTGACCTATTTAATTGTGGAGGTATCACCCC
Three Prime Flanking Region: 
ATTTCATTCCGGTGGTTAAAGAAACCTTATTTC
SNP: 
A/T