MK004133 K1577

Resource Type: 
Genetic Marker
Name: 
MK004133 K1577
Identifier: 
MK004133_K1577
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004133 K1577, is adjacent to primer, K1577_X.
The genetic_marker, MK004133 K1577, is adjacent to primer, K1577_Y.
The genetic_marker, MK004133 K1577, is adjacent to primer, K1577_Common.
The genetic_marker, MK004133 K1577, is located in gene, DCAR_027476.
The genetic_marker, MK004133 K1577, is located in gene, LOC108199759.
The marker_locus, K1577, is an instance of genetic_marker, MK004133 K1577.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr816.841K1577MapViewer
2016 Integ NG full mapCH849.697K1577MapViewer
Synonyms: 
  • MK004133
Sequence Coordinates: 
DCARv2_Chr8:22755866..22755912-
View location in JBrowse: 
DCARv2_Chr8:22755866..22755912-
Sequence: 
CCCCTGCTCCTCCCCCTTCTGATCCTGAACTGCAGAARTGCATTGATAAA
CTTGTAGAGTATGCAGCAAAA
Sequences: 
>MK004133_K1577 ID=MK004133_K1577; Name=MK004133 K1577; organism=Daucus carota; type=genetic_marker
CCCCTGCTCCTCCCCCTTCTGATCCTGAACTGCAGAARTGCATTGATAAA
CTTGTAGAGTATGCAGCAAAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCCCTGCTCCTCCCCCTTCTGATCCTGAACTGCAGAA
Three Prime Flanking Region: 
TGCATTGATAAACTTGTAGAGTATGCAGCAAAA
SNP: 
A/G