MK004145 K1589

Resource Type: 
Genetic Marker
Name: 
MK004145 K1589
Identifier: 
MK004145_K1589
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004145 K1589, is adjacent to primer, K1589_X.
The genetic_marker, MK004145 K1589, is adjacent to primer, K1589_Y.
The genetic_marker, MK004145 K1589, is adjacent to primer, K1589_Common.
The genetic_marker, MK004145 K1589, is located in gene, DCAR_022816.
The genetic_marker, MK004145 K1589, is located in gene, LOC108227886.
The marker_locus, K1589, is an instance of genetic_marker, MK004145 K1589.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH628.702K1589MapViewer
2016 Integ NG full mapCH630.21K1589MapViewer
2016 70796 NG full mapChr620.678K1589MapViewer
2016 70796 NG bin mapChr620.678K1589MapViewer
Synonyms: 
  • MK004145
Sequence Coordinates: 
DCARv2_Chr6:5436018..5436068+
View location in JBrowse: 
Sequence: 
TAAAAGCCCTAATTTATTCGCACACAAACGCACAAACYAGATCAATTTAA
CCGGAGCTCCGATCTACACAA
Sequences: 
>MK004145_K1589 ID=MK004145_K1589; Name=MK004145 K1589; organism=Daucus carota; type=genetic_marker
TAAAAGCCCTAATTTATTCGCACACAAACGCACAAACYAGATCAATTTAA
CCGGAGCTCCGATCTACACAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAAAAGCCCTAATTTATTCGCACACAAACGCACAAAC
Three Prime Flanking Region: 
AGATCAATTTAACCGGAGCTCCGATCTACACAA
SNP: 
C/T