MK004158 K1602

Resource Type: 
Genetic Marker
Name: 
MK004158 K1602
Identifier: 
MK004158_K1602
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004158 K1602, is adjacent to primer, K1602_X.
The genetic_marker, MK004158 K1602, is adjacent to primer, K1602_Y.
The genetic_marker, MK004158 K1602, is adjacent to primer, K1602_Common.
The genetic_marker, MK004158 K1602, is located in gene, DCAR_021668.
The genetic_marker, MK004158 K1602, is located in gene, LOC108226438.
The marker_locus, K1602, is an instance of genetic_marker, MK004158 K1602.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH656.425K1602MapViewer
2016 70796 NG full mapChr650.786K1602MapViewer
Synonyms: 
  • MK004158
Sequence Coordinates: 
DCARv2_Chr6:20890929..20890974+
View location in JBrowse: 
DCARv2_Chr6:20890929..20890974+
Sequence: 
TGTTTGTCGACCTGTGTCAGACTCCCAAACATTGACAWATGGATCCTCAG
GACTTCCTGAAACTACTTTAT
Sequences: 
>MK004158_K1602 ID=MK004158_K1602; Name=MK004158 K1602; organism=Daucus carota; type=genetic_marker
TGTTTGTCGACCTGTGTCAGACTCCCAAACATTGACAWATGGATCCTCAG
GACTTCCTGAAACTACTTTAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGTTTGTCGACCTGTGTCAGACTCCCAAACATTGACA
Three Prime Flanking Region: 
ATGGATCCTCAGGACTTCCTGAAACTACTTTAT
SNP: 
A/T