MK004186 K1630

Resource Type: 
Genetic Marker
Name: 
MK004186 K1630
Identifier: 
MK004186_K1630
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004186 K1630, is adjacent to primer, K1630_X.
The genetic_marker, MK004186 K1630, is adjacent to primer, K1630_Y.
The genetic_marker, MK004186 K1630, is adjacent to primer, K1630_Common.
The genetic_marker, MK004186 K1630, is adjacent to gene, DCAR_019585.
The genetic_marker, MK004186 K1630, is located in gene, LOC108223503.
The marker_locus, K1630, is an instance of genetic_marker, MK004186 K1630.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH563.134K1630MapViewer
2016 70796 NG full mapChr54.606K1630MapViewer
Synonyms: 
  • MK004186
Sequence Coordinates: 
DCARv2_Chr5:40245217..40245269-
View location in JBrowse: 
DCARv2_Chr5:40245217..40245269-
Sequence: 
AAAACACACATACAATATGCAAAACAGAGTAGCACCGYGATGTAGATAGT
TATGACCAACCGAACATATAG
Sequences: 
>MK004186_K1630 ID=MK004186_K1630; Name=MK004186 K1630; organism=Daucus carota; type=genetic_marker
AAAACACACATACAATATGCAAAACAGAGTAGCACCGYGATGTAGATAGT
TATGACCAACCGAACATATAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAACACACATACAATATGCAAAACAGAGTAGCACCG
Three Prime Flanking Region: 
GATGTAGATAGTTATGACCAACCGAACATATAG
SNP: 
C/T