MK004201 K1645

Resource Type: 
Genetic Marker
Name: 
MK004201 K1645
Identifier: 
MK004201_K1645
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004201 K1645, is adjacent to primer, K1645_X.
The genetic_marker, MK004201 K1645, is adjacent to primer, K1645_Y.
The genetic_marker, MK004201 K1645, is adjacent to primer, K1645_Common.
The genetic_marker, MK004201 K1645, is located in gene, DCAR_022811.
The genetic_marker, MK004201 K1645, is located in gene, LOC108228176.
The marker_locus, K1645, is an instance of genetic_marker, MK004201 K1645.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr621.301K1645MapViewer
2016 Integ NG full mapCH630.63K1645MapViewer
2016 70796 NG bin mapChr621.301K1645MapViewer
2016 Integ NG bin mapCH629.092K1645MapViewer
Synonyms: 
  • MK004201
Sequence Coordinates: 
DCARv2_Chr6:5512205..5512252+
View location in JBrowse: 
DCARv2_Chr6:5512205..5512252+
Sequence: 
GGTCTTGTGATCCAGATTTGAGGTTGAGGGGTCATGAWAAAGAAGGGTAT
GGATTGTCATGGAGCCCATTT
Sequences: 
>MK004201_K1645 ID=MK004201_K1645; Name=MK004201 K1645; organism=Daucus carota; type=genetic_marker
GGTCTTGTGATCCAGATTTGAGGTTGAGGGGTCATGAWAAAGAAGGGTAT
GGATTGTCATGGAGCCCATTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGTCTTGTGATCCAGATTTGAGGTTGAGGGGTCATGA
Three Prime Flanking Region: 
AAAGAAGGGTATGGATTGTCATGGAGCCCATTT
SNP: 
A/T