MK004217 K1661

Resource Type: 
Genetic Marker
Name: 
MK004217 K1661
Identifier: 
MK004217_K1661
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004217 K1661, is adjacent to primer, K1661_X.
The genetic_marker, MK004217 K1661, is adjacent to primer, K1661_Y.
The genetic_marker, MK004217 K1661, is adjacent to primer, K1661_Common.
The genetic_marker, MK004217 K1661, is located in gene, DCAR_030189.
The genetic_marker, MK004217 K1661, is located in gene, LOC108202832.
The marker_locus, K1661, is an instance of genetic_marker, MK004217 K1661.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr936.708K1661MapViewer
2016 70796 NG full mapChr936.708K1661MapViewer
2016 Integ NG full mapCH933.11K1661MapViewer
2016 Integ NG bin mapCH935.267K1661MapViewer
Synonyms: 
  • MK004217
Sequence Coordinates: 
DCARv2_Chr9:21903221..21903270+
View location in JBrowse: 
DCARv2_Chr9:21903221..21903270+
Sequence: 
CGGAAGAATCATGACTTTGATCTGGATTCTAGTGCTTYAGATGACTCAGG
TGATGAGGATACWGCTGCAGC
Sequences: 
>MK004217_K1661 ID=MK004217_K1661; Name=MK004217 K1661; organism=Daucus carota; type=genetic_marker
CGGAAGAATCATGACTTTGATCTGGATTCTAGTGCTTYAGATGACTCAGG
TGATGAGGATACWGCTGCAGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGGAAGAATCATGACTTTGATCTGGATTCTAGTGCTT
Three Prime Flanking Region: 
AGATGACTCAGGTGATGAGGATACWGCTGCAGC
SNP: 
C/T