MK004226 K1670

Resource Type: 
Genetic Marker
Name: 
MK004226 K1670
Identifier: 
MK004226_K1670
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004226 K1670, is adjacent to primer, K1670_X.
The genetic_marker, MK004226 K1670, is adjacent to primer, K1670_Y.
The genetic_marker, MK004226 K1670, is adjacent to primer, K1670_Common.
The genetic_marker, MK004226 K1670, is located in gene, DCAR_017644.
The genetic_marker, MK004226 K1670, is located in gene, LOC108220701.
The marker_locus, K1670, is an instance of genetic_marker, MK004226 K1670.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr525.724K1670MapViewer
2016 Integ NG full mapCH542.413K1670MapViewer
Synonyms: 
  • MK004226
Sequence Coordinates: 
DCARv2_Chr5:22019900..22019945-
View location in JBrowse: 
DCARv2_Chr5:22019900..22019945-
Sequence: 
GACTCWGAGGAAGATTGTGAGCAGTGACATGGAGAAAMAACAACACTAGT
GTTTTTGTTGGAGGGTCTCAC
Sequences: 
>MK004226_K1670 ID=MK004226_K1670; Name=MK004226 K1670; organism=Daucus carota; type=genetic_marker
GACTCWGAGGAAGATTGTGAGCAGTGACATGGAGAAAMAACAACACTAGT
GTTTTTGTTGGAGGGTCTCAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GACTCWGAGGAAGATTGTGAGCAGTGACATGGAGAAA
Three Prime Flanking Region: 
AACAACACTAGTGTTTTTGTTGGAGGGTCTCAC
SNP: 
A/C