MK004227 K1671

Resource Type: 
Genetic Marker
Name: 
MK004227 K1671
Identifier: 
MK004227_K1671
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004227 K1671, is adjacent to primer, K1671_X.
The genetic_marker, MK004227 K1671, is adjacent to primer, K1671_Y.
The genetic_marker, MK004227 K1671, is adjacent to primer, K1671_Common.
The genetic_marker, MK004227 K1671, is adjacent to gene, DCAR_021783.
The genetic_marker, MK004227 K1671, is located in gene, LOC108227181.
The marker_locus, K1671, is an instance of genetic_marker, MK004227 K1671.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr649.664K1671MapViewer
2016 Integ NG bin mapCH651.75K1671MapViewer
2016 Integ NG full mapCH655.784K1671MapViewer
2016 80592 NG full mapChr69.453K1671MapViewer
2016 70796 NG full mapChr649.664K1671MapViewer
Synonyms: 
  • MK004227
Sequence Coordinates: 
DCARv2_Chr6:19813461..19813525-
View location in JBrowse: 
DCARv2_Chr6:19813461..19813525-
Sequence: 
AAGTAAAAAGGGGCAATAAATATCAAAAAACAGCAAGYGTCACGTCCCCA
AAAGATAACTTCCATTCCAAT
Sequences: 
>MK004227_K1671 ID=MK004227_K1671; Name=MK004227 K1671; organism=Daucus carota; type=genetic_marker
AAGTAAAAAGGGGCAATAAATATCAAAAAACAGCAAGYGTCACGTCCCCA
AAAGATAACTTCCATTCCAAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGTAAAAAGGGGCAATAAATATCAAAAAACAGCAAG
Three Prime Flanking Region: 
GTCACGTCCCCAAAAGATAACTTCCATTCCAAT
SNP: 
C/T