MK004244 K1688

Resource Type: 
Genetic Marker
Name: 
MK004244 K1688
Identifier: 
MK004244_K1688
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004244 K1688, is adjacent to primer, K1688_X.
The genetic_marker, MK004244 K1688, is adjacent to primer, K1688_Y.
The genetic_marker, MK004244 K1688, is adjacent to primer, K1688_Common.
The genetic_marker, MK004244 K1688, is located in gene, DCAR_018814.
The genetic_marker, MK004244 K1688, is located in gene, LOC108223962.
The marker_locus, K1688, is an instance of genetic_marker, MK004244 K1688.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr514.035K1688MapViewer
2016 Integ NG full mapCH553.526K1688MapViewer
Synonyms: 
  • MK004244
Sequence Coordinates: 
DCARv2_Chr5:33521496..33521549-
View location in JBrowse: 
DCARv2_Chr5:33521496..33521549-
Sequence: 
GGCTGGAAGTAGGAGAGGGTGGCATTTTTATTTGGACRAAATCCTGAGAG
GAGATATCCTGGTTTCTTGCT
Sequences: 
>MK004244_K1688 ID=MK004244_K1688; Name=MK004244 K1688; organism=Daucus carota; type=genetic_marker
GGCTGGAAGTAGGAGAGGGTGGCATTTTTATTTGGACRAAATCCTGAGAG
GAGATATCCTGGTTTCTTGCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGCTGGAAGTAGGAGAGGGTGGCATTTTTATTTGGAC
Three Prime Flanking Region: 
AAATCCTGAGAGGAGATATCCTGGTTTCTTGCT
SNP: 
A/G