MK004272 K1716

Resource Type: 
Genetic Marker
Name: 
MK004272 K1716
Identifier: 
MK004272_K1716
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004272 K1716, is adjacent to primer, K1716_X.
The genetic_marker, MK004272 K1716, is adjacent to primer, K1716_Y.
The genetic_marker, MK004272 K1716, is adjacent to primer, K1716_Common.
The genetic_marker, MK004272 K1716, is located in gene, DCAR_026657.
The genetic_marker, MK004272 K1716, is located in gene, LOC108197125.
The marker_locus, K1716, is an instance of genetic_marker, MK004272 K1716.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH861.554K1716MapViewer
2016 70796 NG bin mapChr84.745K1716MapViewer
2016 70796 NG full mapChr84.745K1716MapViewer
Synonyms: 
  • MK004272
Sequence Coordinates: 
DCARv2_Chr8:29935366..29935411-
View location in JBrowse: 
DCARv2_Chr8:29935366..29935411-
Sequence: 
GCAGCAACCTACTGCAAAGCTTCAGCTGGAAGAGTTGWCTCAACGAATAG
GTGGTATGGAGAAGAGGCAGG
Sequences: 
>MK004272_K1716 ID=MK004272_K1716; Name=MK004272 K1716; organism=Daucus carota; type=genetic_marker
GCAGCAACCTACTGCAAAGCTTCAGCTGGAAGAGTTGWCTCAACGAATAG
GTGGTATGGAGAAGAGGCAGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCAGCAACCTACTGCAAAGCTTCAGCTGGAAGAGTTG
Three Prime Flanking Region: 
CTCAACGAATAGGTGGTATGGAGAAGAGGCAGG
SNP: 
A/T