MK004273 K1717

Resource Type: 
Genetic Marker
Name: 
MK004273 K1717
Identifier: 
MK004273_K1717
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004273 K1717, is adjacent to primer, K1717_X.
The genetic_marker, MK004273 K1717, is adjacent to primer, K1717_Y.
The genetic_marker, MK004273 K1717, is adjacent to primer, K1717_Common.
The genetic_marker, MK004273 K1717, is located in gene, DCAR_021206.
The genetic_marker, MK004273 K1717, is located in gene, LOC108227553.
The marker_locus, K1717, is an instance of genetic_marker, MK004273 K1717.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr652.627K1717MapViewer
2016 Integ NG bin mapCH654.713K1717MapViewer
2016 Integ NG full mapCH658.268K1717MapViewer
2016 70796 NG full mapChr652.627K1717MapViewer
Synonyms: 
  • MK004273
Sequence Coordinates: 
DCARv2_Chr6:25125853..25125909-
View location in JBrowse: 
DCARv2_Chr6:25125853..25125909-
Sequence: 
GCCTCCTAAAGCTGAATGTCCTTGATCTTCGATTCAAYAAAATTTCTACA
ACAAAATGTCTTGGGCAACTT
Sequences: 
>MK004273_K1717 ID=MK004273_K1717; Name=MK004273 K1717; organism=Daucus carota; type=genetic_marker
GCCTCCTAAAGCTGAATGTCCTTGATCTTCGATTCAAYAAAATTTCTACA
ACAAAATGTCTTGGGCAACTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCCTCCTAAAGCTGAATGTCCTTGATCTTCGATTCAA
Three Prime Flanking Region: 
AAAATTTCTACAACAAAATGTCTTGGGCAACTT
SNP: 
C/T