MK004294 K1738

Resource Type: 
Genetic Marker
Name: 
MK004294 K1738
Identifier: 
MK004294_K1738
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004294 K1738, is adjacent to primer, K1738_X.
The genetic_marker, MK004294 K1738, is adjacent to primer, K1738_Y.
The genetic_marker, MK004294 K1738, is adjacent to primer, K1738_Common.
The genetic_marker, MK004294 K1738, is located in gene, DCAR_004409.
The genetic_marker, MK004294 K1738, is located in gene, LOC108214378.
The marker_locus, K1738, is an instance of genetic_marker, MK004294 K1738.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr113.183K1738MapViewer
2016 70796 NG full mapChr154.13K1738MapViewer
2016 Integ NG full mapCH164.999K1738MapViewer
Synonyms: 
  • MK004294
Sequence Coordinates: 
DCARv2_Chr1:47869978..47870021-
View location in JBrowse: 
DCARv2_Chr1:47869978..47870021-
Sequence: 
TGAGTGGCCATCTGGTGGCGAAGCTTGTGGAAGTTGGSGCGCTTGGAGGG
ATGAATATGGTATTGTAATGA
Sequences: 
>MK004294_K1738 ID=MK004294_K1738; Name=MK004294 K1738; organism=Daucus carota; type=genetic_marker
TGAGTGGCCATCTGGTGGCGAAGCTTGTGGAAGTTGGSGCGCTTGGAGGG
ATGAATATGGTATTGTAATGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGAGTGGCCATCTGGTGGCGAAGCTTGTGGAAGTTGG
Three Prime Flanking Region: 
GCGCTTGGAGGGATGAATATGGTATTGTAATGA
SNP: 
C/G