MK004296 K1740

Resource Type: 
Genetic Marker
Name: 
MK004296 K1740
Identifier: 
MK004296_K1740
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004296 K1740, is adjacent to primer, K1740_X.
The genetic_marker, MK004296 K1740, is adjacent to primer, K1740_Y.
The genetic_marker, MK004296 K1740, is adjacent to primer, K1740_Common.
The genetic_marker, MK004296 K1740, is located in gene, DCAR_021994.
The genetic_marker, MK004296 K1740, is located in gene, LOC108225728.
The marker_locus, K1740, is an instance of genetic_marker, MK004296 K1740.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH654.32K1740MapViewer
2016 70796 NG bin mapChr648.668K1740MapViewer
2016 70796 NG full mapChr648.668K1740MapViewer
2016 Integ NG bin mapCH650.709K1740MapViewer
Synonyms: 
  • MK004296
Sequence Coordinates: 
DCARv2_Chr6:17737208..17737262-
View location in JBrowse: 
DCARv2_Chr6:17737208..17737262-
Sequence: 
CGCCATCTTTCACCCGCCCCTCTACTTTGATCTCTCCRGAATCAGAAATA
GCACTAGCAAATTTTGATTCT
Sequences: 
>MK004296_K1740 ID=MK004296_K1740; Name=MK004296 K1740; organism=Daucus carota; type=genetic_marker
CGCCATCTTTCACCCGCCCCTCTACTTTGATCTCTCCRGAATCAGAAATA
GCACTAGCAAATTTTGATTCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGCCATCTTTCACCCGCCCCTCTACTTTGATCTCTCC
Three Prime Flanking Region: 
GAATCAGAAATAGCACTAGCAAATTTTGATTCT
SNP: 
A/G