MK004306 K1750

Resource Type: 
Genetic Marker
Name: 
MK004306 K1750
Identifier: 
MK004306_K1750
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004306 K1750, is adjacent to primer, K1750_X.
The genetic_marker, MK004306 K1750, is adjacent to primer, K1750_Y.
The genetic_marker, MK004306 K1750, is adjacent to primer, K1750_Common.
The genetic_marker, MK004306 K1750, is located in gene, DCAR_016696.
The genetic_marker, MK004306 K1750, is located in gene, LOC108219850.
The marker_locus, K1750, is an instance of genetic_marker, MK004306 K1750.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH515.582K1750MapViewer
2016 70796 NG bin mapChr558.774K1750MapViewer
2016 Integ NG full mapCH516.551K1750MapViewer
2016 70796 NG full mapChr558.774K1750MapViewer
Synonyms: 
  • MK004306
Sequence Coordinates: 
DCARv2_Chr5:6571625..6571671-
View location in JBrowse: 
DCARv2_Chr5:6571625..6571671-
Sequence: 
CGTAGCTCGGGGAGCACACAGCCCGAATAGAATTCTTYACAAGAAGTGGA
AGTCCTTCCGTTGCCCTTACA
Sequences: 
>MK004306_K1750 ID=MK004306_K1750; Name=MK004306 K1750; organism=Daucus carota; type=genetic_marker
CGTAGCTCGGGGAGCACACAGCCCGAATAGAATTCTTYACAAGAAGTGGA
AGTCCTTCCGTTGCCCTTACA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGTAGCTCGGGGAGCACACAGCCCGAATAGAATTCTT
Three Prime Flanking Region: 
ACAAGAAGTGGAAGTCCTTCCGTTGCCCTTACA
SNP: 
C/T