MK004338 K1782

Resource Type: 
Genetic Marker
Name: 
MK004338 K1782
Identifier: 
MK004338_K1782
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004338 K1782, is adjacent to primer, K1782_X.
The genetic_marker, MK004338 K1782, is adjacent to primer, K1782_Y.
The genetic_marker, MK004338 K1782, is adjacent to primer, K1782_Common.
The genetic_marker, MK004338 K1782, is located in gene, DCAR_031025.
The genetic_marker, MK004338 K1782, is located in gene, LOC108202829.
The marker_locus, K1782, is an instance of genetic_marker, MK004338 K1782.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr953.942K1782MapViewer
2016 Integ NG bin mapCH951.479K1782MapViewer
2016 Integ NG full mapCH949.104K1782MapViewer
2016 70796 NG bin mapChr953.942K1782MapViewer
Synonyms: 
  • MK004338
Sequence Coordinates: 
DCARv2_Chr9:31963679..31963734+
View location in JBrowse: 
DCARv2_Chr9:31963679..31963734+
Sequence: 
GCCATGGGAAAGGGGTCACATATCCTTTGGGGGCAGGRATAAGGCAGCGT
AACTTCTTTTCCGGCGGCGGG
Sequences: 
>MK004338_K1782 ID=MK004338_K1782; Name=MK004338 K1782; organism=Daucus carota; type=genetic_marker
GCCATGGGAAAGGGGTCACATATCCTTTGGGGGCAGGRATAAGGCAGCGT
AACTTCTTTTCCGGCGGCGGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCCATGGGAAAGGGGTCACATATCCTTTGGGGGCAGG
Three Prime Flanking Region: 
ATAAGGCAGCGTAACTTCTTTTCCGGCGGCGGG
SNP: 
A/G