MK004416 K1860

Resource Type: 
Genetic Marker
Name: 
MK004416 K1860
Identifier: 
MK004416_K1860
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004416 K1860, is adjacent to primer, K1860_X.
The genetic_marker, MK004416 K1860, is adjacent to primer, K1860_Y.
The genetic_marker, MK004416 K1860, is adjacent to primer, K1860_Common.
The genetic_marker, MK004416 K1860, is located in gene, DCAR_018947.
The genetic_marker, MK004416 K1860, is located in gene, LOC108223536.
The marker_locus, K1860, is an instance of genetic_marker, MK004416 K1860.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr538.865K1860MapViewer
2016 Integ NG full mapCH553.165K1860MapViewer
2016 70796 NG full mapChr513.241K1860MapViewer
Synonyms: 
  • MK004416
Sequence Coordinates: 
DCARv2_Chr5:34706111..34706169+
View location in JBrowse: 
DCARv2_Chr5:34706111..34706169+
Sequence: 
TACTAGTGAGCTGTTCAATAAATTCCTGTAAGCCAGGYCCCATGAGAAAC
TCATTCAAATTAGCATGCTGA
Sequences: 
>MK004416_K1860 ID=MK004416_K1860; Name=MK004416 K1860; organism=Daucus carota; type=genetic_marker
TACTAGTGAGCTGTTCAATAAATTCCTGTAAGCCAGGYCCCATGAGAAAC
TCATTCAAATTAGCATGCTGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TACTAGTGAGCTGTTCAATAAATTCCTGTAAGCCAGG
Three Prime Flanking Region: 
CCCATGAGAAACTCATTCAAATTAGCATGCTGA
SNP: 
C/T