MK004440 K1884

Resource Type: 
Genetic Marker
Name: 
MK004440 K1884
Identifier: 
MK004440_K1884
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004440 K1884, is adjacent to primer, K1884_X.
The genetic_marker, MK004440 K1884, is adjacent to primer, K1884_Y.
The genetic_marker, MK004440 K1884, is adjacent to primer, K1884_Common.
The genetic_marker, MK004440 K1884, is located in gene, DCAR_028968.
The genetic_marker, MK004440 K1884, is located in gene, LOC108200985.
The marker_locus, K1884, is an instance of genetic_marker, MK004440 K1884.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH90K1884MapViewer
2016 70796 NG full mapChr90K1884MapViewer
2016 Integ NG bin mapCH90K1884MapViewer
2016 70796 NG bin mapChr90K1884MapViewer
Synonyms: 
  • MK004440
Sequence Coordinates: 
DCARv2_Chr9:281334..281387-
View location in JBrowse: 
DCARv2_Chr9:281334..281387-
Sequence: 
GACATGGTCATCTGATGGTATCAGCAGGAATGATGGGYTGGATTTTAAAT
CTAGGACAACTGTAGGAAGCG
Sequences: 
>MK004440_K1884 ID=MK004440_K1884; Name=MK004440 K1884; organism=Daucus carota; type=genetic_marker
GACATGGTCATCTGATGGTATCAGCAGGAATGATGGGYTGGATTTTAAAT
CTAGGACAACTGTAGGAAGCG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GACATGGTCATCTGATGGTATCAGCAGGAATGATGGG
Three Prime Flanking Region: 
TGGATTTTAAATCTAGGACAACTGTAGGAAGCG
SNP: 
C/T