MK004448 K1892

Resource Type: 
Genetic Marker
Name: 
MK004448 K1892
Identifier: 
MK004448_K1892
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004448 K1892, is adjacent to primer, K1892_X.
The genetic_marker, MK004448 K1892, is adjacent to primer, K1892_Y.
The genetic_marker, MK004448 K1892, is adjacent to primer, K1892_Common.
The genetic_marker, MK004448 K1892, is located in gene, DCAR_030865.
The genetic_marker, MK004448 K1892, is adjacent to gene, LOC108202567.
The marker_locus, K1892, is an instance of genetic_marker, MK004448 K1892.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH944.783K1892MapViewer
2016 70796 NG full mapChr949.791K1892MapViewer
Synonyms: 
  • MK004448
Sequence Coordinates: 
DCARv2_Chr9:30544225..30546392-
View location in JBrowse: 
DCARv2_Chr9:30544225..30546392-
Sequence: 
AAAAACTTCCATGGGGTATTGTATTACTACTAGGAGCYGGATTAGCCTTA
GCCGAGGGAGTCCAAACAAGT
Sequences: 
>MK004448_K1892 ID=MK004448_K1892; Name=MK004448 K1892; organism=Daucus carota; type=genetic_marker
AAAAACTTCCATGGGGTATTGTATTACTACTAGGAGCYGGATTAGCCTTA
GCCGAGGGAGTCCAAACAAGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAAACTTCCATGGGGTATTGTATTACTACTAGGAGC
Three Prime Flanking Region: 
GGATTAGCCTTAGCCGAGGGAGTCCAAACAAGT
SNP: 
C/T