MK004480 K1924

Resource Type: 
Genetic Marker
Name: 
MK004480 K1924
Identifier: 
MK004480_K1924
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004480 K1924, is adjacent to primer, K1924_X.
The genetic_marker, MK004480 K1924, is adjacent to primer, K1924_Y.
The genetic_marker, MK004480 K1924, is adjacent to primer, K1924_Common.
The genetic_marker, MK004480 K1924, is adjacent to gene, DCAR_022551.
The genetic_marker, MK004480 K1924, is located in gene, LOC108227413.
The marker_locus, K1924, is an instance of genetic_marker, MK004480 K1924.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH650.97K1924MapViewer
2016 70796 NG full mapChr645.414K1924MapViewer
Synonyms: 
  • MK004480
Sequence Coordinates: 
DCARv2_Chr6:10441746..10441800+
View location in JBrowse: 
DCARv2_Chr6:10441746..10441800+
Sequence: 
CTTTATTTCAAGTAACAATATAGTTTCTCTAACCTTTKGTTCGCTTCTGT
AAATTGTGACACYGAGATAAT
Sequences: 
>MK004480_K1924 ID=MK004480_K1924; Name=MK004480 K1924; organism=Daucus carota; type=genetic_marker
CTTTATTTCAAGTAACAATATAGTTTCTCTAACCTTTKGTTCGCTTCTGT
AAATTGTGACACYGAGATAAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTTTATTTCAAGTAACAATATAGTTTCTCTAACCTTT
Three Prime Flanking Region: 
GTTCGCTTCTGTAAATTGTGACACYGAGATAAT
SNP: 
G/T