MK004497 K1941

Resource Type: 
Genetic Marker
Name: 
MK004497 K1941
Identifier: 
MK004497_K1941
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004497 K1941, is adjacent to primer, K1941_X.
The genetic_marker, MK004497 K1941, is adjacent to primer, K1941_Y.
The genetic_marker, MK004497 K1941, is adjacent to primer, K1941_Common.
The genetic_marker, MK004497 K1941, is located in gene, DCAR_026814.
The genetic_marker, MK004497 K1941, is located in gene, LOC108199716.
The marker_locus, K1941, is an instance of genetic_marker, MK004497 K1941.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH857.107K1941MapViewer
2016 70796 NG full mapChr89.324K1941MapViewer
Synonyms: 
  • MK004497
Sequence Coordinates: 
DCARv2_Chr8:28447566..28447611-
View location in JBrowse: 
DCARv2_Chr8:28447566..28447611-
Sequence: 
GTGCAGGGYTARTTGTTTTCTGTCTTTACAGAGCCAARCGTAAGCGTTCA
GGTAGAGTGCAGTCTCCCAAT
Sequences: 
>MK004497_K1941 ID=MK004497_K1941; Name=MK004497 K1941; organism=Daucus carota; type=genetic_marker
GTGCAGGGYTARTTGTTTTCTGTCTTTACAGAGCCAARCGTAAGCGTTCA
GGTAGAGTGCAGTCTCCCAAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTGCAGGGYTARTTGTTTTCTGTCTTTACAGAGCCAA
Three Prime Flanking Region: 
CGTAAGCGTTCAGGTAGAGTGCAGTCTCCCAAT
SNP: 
A/G