MK004498 K1942

Resource Type: 
Genetic Marker
Name: 
MK004498 K1942
Identifier: 
MK004498_K1942
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004498 K1942, is adjacent to primer, K1942_X.
The genetic_marker, MK004498 K1942, is adjacent to primer, K1942_Y.
The genetic_marker, MK004498 K1942, is adjacent to primer, K1942_Common.
The genetic_marker, MK004498 K1942, is located in gene, DCAR_029968.
The genetic_marker, MK004498 K1942, is located in gene, LOC108203100.
The marker_locus, K1942, is an instance of genetic_marker, MK004498 K1942.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH930.704K1942MapViewer
2016 Integ NG full mapCH928.524K1942MapViewer
2016 70796 NG bin mapChr931.444K1942MapViewer
2016 70796 NG full mapChr931.444K1942MapViewer
Synonyms: 
  • MK004498
Sequence Coordinates: 
DCARv2_Chr9:18347434..18347478-
View location in JBrowse: 
Sequence: 
ATGAGCATTACCAATCACAGCACTTGGTTCTGTCAAGWATACCTGGGACT
GCTATGCGCCCTTCATCATCA
Sequences: 
>MK004498_K1942 ID=MK004498_K1942; Name=MK004498 K1942; organism=Daucus carota; type=genetic_marker
ATGAGCATTACCAATCACAGCACTTGGTTCTGTCAAGWATACCTGGGACT
GCTATGCGCCCTTCATCATCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATGAGCATTACCAATCACAGCACTTGGTTCTGTCAAG
Three Prime Flanking Region: 
ATACCTGGGACTGCTATGCGCCCTTCATCATCA
SNP: 
A/T