MK004562 K2006

Resource Type: 
Genetic Marker
Name: 
MK004562 K2006
Identifier: 
MK004562_K2006
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004562 K2006, is adjacent to primer, K2006_X.
The genetic_marker, MK004562 K2006, is adjacent to primer, K2006_Y.
The genetic_marker, MK004562 K2006, is adjacent to primer, K2006_Common.
The genetic_marker, MK004562 K2006, is located in gene, DCAR_021818.
The genetic_marker, MK004562 K2006, is located in gene, LOC108192781.
The marker_locus, K2006, is an instance of genetic_marker, MK004562 K2006.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH655.301K2006MapViewer
2016 70796 NG full mapChr649.664K2006MapViewer
Synonyms: 
  • MK004562
Sequence Coordinates: 
DCARv2_Chr6:19535082..19535129+
View location in JBrowse: 
DCARv2_Chr6:19535082..19535129+
Sequence: 
GGCTTGTTGTCATTGGTGTCTGCACTCATCTTGGTTGYATTCCATTACCA
AATGCAGGTGATTTTGGTGGG
Sequences: 
>MK004562_K2006 ID=MK004562_K2006; Name=MK004562 K2006; organism=Daucus carota; type=genetic_marker
GGCTTGTTGTCATTGGTGTCTGCACTCATCTTGGTTGYATTCCATTACCA
AATGCAGGTGATTTTGGTGGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGCTTGTTGTCATTGGTGTCTGCACTCATCTTGGTTG
Three Prime Flanking Region: 
ATTCCATTACCAAATGCAGGTGATTTTGGTGGG
SNP: 
C/T