MK004572 K2016

Resource Type: 
Genetic Marker
Name: 
MK004572 K2016
Identifier: 
MK004572_K2016
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004572 K2016, is adjacent to primer, K2016_X.
The genetic_marker, MK004572 K2016, is adjacent to primer, K2016_Y.
The genetic_marker, MK004572 K2016, is adjacent to primer, K2016_Common.
The genetic_marker, MK004572 K2016, is located in gene, DCAR_027735.
The genetic_marker, MK004572 K2016, is located in gene, LOC108199243.
The marker_locus, K2016, is an instance of genetic_marker, MK004572 K2016.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr818.347K2016MapViewer
2016 Integ NG full mapCH848.276K2016MapViewer
Synonyms: 
  • MK004572
Sequence Coordinates: 
DCARv2_Chr8:20080114..20080167+
View location in JBrowse: 
DCARv2_Chr8:20080114..20080167+
Sequence: 
CACCTTGCGGGGCAGCATTTCCTTCACCCATTATATGMTTAATTTCTCGA
TCAGACTGAGAAAACTGTTGC
Sequences: 
>MK004572_K2016 ID=MK004572_K2016; Name=MK004572 K2016; organism=Daucus carota; type=genetic_marker
CACCTTGCGGGGCAGCATTTCCTTCACCCATTATATGMTTAATTTCTCGA
TCAGACTGAGAAAACTGTTGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CACCTTGCGGGGCAGCATTTCCTTCACCCATTATATG
Three Prime Flanking Region: 
TTAATTTCTCGATCAGACTGAGAAAACTGTTGC
SNP: 
A/C