MK004583 K2027

Resource Type: 
Genetic Marker
Name: 
MK004583 K2027
Identifier: 
MK004583_K2027
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004583 K2027, is adjacent to primer, K2027_X.
The genetic_marker, MK004583 K2027, is adjacent to primer, K2027_Y.
The genetic_marker, MK004583 K2027, is adjacent to primer, K2027_Common.
The genetic_marker, MK004583 K2027, is located in gene, DCAR_004282.
The genetic_marker, MK004583 K2027, is located in gene, LOC108209355.
The marker_locus, K2027, is an instance of genetic_marker, MK004583 K2027.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr115.001K2027MapViewer
2016 Integ NG full mapCH161.39K2027MapViewer
Synonyms: 
  • MK004583
Sequence Coordinates: 
DCARv2_Chr1:46451393..46451449-
View location in JBrowse: 
DCARv2_Chr1:46451393..46451449-
Sequence: 
AAGTCCGATACAAGTGTGAAAAAGCAGTTAACCAACTYGCCGCACCAGAA
AATGCCTGGAGGCCGCTCAAC
Sequences: 
>MK004583_K2027 ID=MK004583_K2027; Name=MK004583 K2027; organism=Daucus carota; type=genetic_marker
AAGTCCGATACAAGTGTGAAAAAGCAGTTAACCAACTYGCCGCACCAGAA
AATGCCTGGAGGCCGCTCAAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGTCCGATACAAGTGTGAAAAAGCAGTTAACCAACT
Three Prime Flanking Region: 
GCCGCACCAGAAAATGCCTGGAGGCCGCTCAAC
SNP: 
C/T