MK004601 K2045

Resource Type: 
Genetic Marker
Name: 
MK004601 K2045
Identifier: 
MK004601_K2045
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004601 K2045, is adjacent to primer, K2045_X.
The genetic_marker, MK004601 K2045, is adjacent to primer, K2045_Y.
The genetic_marker, MK004601 K2045, is adjacent to primer, K2045_Common.
The genetic_marker, MK004601 K2045, is located in gene, DCAR_027029.
The genetic_marker, MK004601 K2045, is located in gene, LOC108199603.
The marker_locus, K2045, is an instance of genetic_marker, MK004601 K2045.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr811.219K2045MapViewer
2016 70796 NG full mapChr811.219K2045MapViewer
2016 Integ NG bin mapCH849.625K2045MapViewer
2016 Integ NG full mapCH855.193K2045MapViewer
Synonyms: 
  • MK004601
Sequence Coordinates: 
DCARv2_Chr8:26715866..26715916-
View location in JBrowse: 
DCARv2_Chr8:26715866..26715916-
Sequence: 
CTTATGGATCGATATCTTCGTTCAATGATCTAGAACTYCAAGCATATGCT
GCAAGTGGTCAACTCCCAGCA
Sequences: 
>MK004601_K2045 ID=MK004601_K2045; Name=MK004601 K2045; organism=Daucus carota; type=genetic_marker
CTTATGGATCGATATCTTCGTTCAATGATCTAGAACTYCAAGCATATGCT
GCAAGTGGTCAACTCCCAGCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTTATGGATCGATATCTTCGTTCAATGATCTAGAACT
Three Prime Flanking Region: 
CAAGCATATGCTGCAAGTGGTCAACTCCCAGCA
SNP: 
C/T