MK004716 K2160

Resource Type: 
Genetic Marker
Name: 
MK004716 K2160
Identifier: 
MK004716_K2160
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK004716 K2160, is adjacent to primer, K2160_X.
The genetic_marker, MK004716 K2160, is adjacent to primer, K2160_Y.
The genetic_marker, MK004716 K2160, is adjacent to primer, K2160_Common.
The genetic_marker, MK004716 K2160, is located in gene, LOC108227238.
The marker_locus, K2160, is an instance of genetic_marker, MK004716 K2160.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH656.431K2160MapViewer
2016 70796 NG full mapChr650.786K2160MapViewer
Synonyms: 
  • MK004716
Sequence Coordinates: 
DCARv2_Chr6:22126713..22126772+
View location in JBrowse: 
DCARv2_Chr6:22126713..22126772+
Sequence: 
GCTTAAATCAACGTGTACAGATGCTCAAATCAACGTGYAGCACAAGGATC
ACTTATCCCGCAAAGTTGAAC
Sequences: 
>MK004716_K2160 ID=MK004716_K2160; Name=MK004716 K2160; organism=Daucus carota; type=genetic_marker
GCTTAAATCAACGTGTACAGATGCTCAAATCAACGTGYAGCACAAGGATC
ACTTATCCCGCAAAGTTGAAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCTTAAATCAACGTGTACAGATGCTCAAATCAACGTG
Three Prime Flanking Region: 
AGCACAAGGATCACTTATCCCGCAAAGTTGAAC
SNP: 
C/T