MK004721 K2165

Resource Type: 
Genetic Marker
Name: 
MK004721 K2165
Identifier: 
MK004721_K2165
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004721 K2165, is adjacent to primer, K2165_X.
The genetic_marker, MK004721 K2165, is adjacent to primer, K2165_Y.
The genetic_marker, MK004721 K2165, is adjacent to primer, K2165_Common.
The genetic_marker, MK004721 K2165, is located in gene, DCAR_022638.
The genetic_marker, MK004721 K2165, is located in gene, LOC108228104.
The marker_locus, K2165, is an instance of genetic_marker, MK004721 K2165.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH645.766K2165MapViewer
2016 Integ NG full mapCH649.427K2165MapViewer
2016 70796 NG bin mapChr643.735K2165MapViewer
2016 70796 NG full mapChr643.735K2165MapViewer
Synonyms: 
  • MK004721
Sequence Coordinates: 
DCARv2_Chr6:9361827..9361883+
View location in JBrowse: 
DCARv2_Chr6:9361827..9361883+
Sequence: 
TTCCAAYAGCAGAGTCTGAAATGTCATCAAAATTCGAYAGTGAGGCTCCA
TTTACTTCTATCTGATCCTTT
Sequences: 
>MK004721_K2165 ID=MK004721_K2165; Name=MK004721 K2165; organism=Daucus carota; type=genetic_marker
TTCCAAYAGCAGAGTCTGAAATGTCATCAAAATTCGAYAGTGAGGCTCCA
TTTACTTCTATCTGATCCTTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTCCAAYAGCAGAGTCTGAAATGTCATCAAAATTCGA
Three Prime Flanking Region: 
AGTGAGGCTCCATTTACTTCTATCTGATCCTTT
SNP: 
C/T