MK004725 K2169

Resource Type: 
Genetic Marker
Name: 
MK004725 K2169
Identifier: 
MK004725_K2169
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004725 K2169, is adjacent to primer, K2169_X.
The genetic_marker, MK004725 K2169, is adjacent to primer, K2169_Y.
The genetic_marker, MK004725 K2169, is adjacent to primer, K2169_Common.
The genetic_marker, MK004725 K2169, is located in gene, DCAR_016189.
The genetic_marker, MK004725 K2169, is located in gene, LOC108223231.
The marker_locus, K2169, is an instance of genetic_marker, MK004725 K2169.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH54.76K2169MapViewer
2016 70796 NG bin mapChr570.268K2169MapViewer
2016 70796 NG full mapChr570.268K2169MapViewer
Synonyms: 
  • MK004725
Sequence Coordinates: 
DCARv2_Chr5:1093734..1093800-
View location in JBrowse: 
DCARv2_Chr5:1093734..1093800-
Sequence: 
GTTATCGGTGATTGCAGAAGAATCTCCACTGTGGCGTYGGAGAACATGAT
GTTGTTTTCGTATTATAGTCT
Sequences: 
>MK004725_K2169 ID=MK004725_K2169; Name=MK004725 K2169; organism=Daucus carota; type=genetic_marker
GTTATCGGTGATTGCAGAAGAATCTCCACTGTGGCGTYGGAGAACATGAT
GTTGTTTTCGTATTATAGTCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTTATCGGTGATTGCAGAAGAATCTCCACTGTGGCGT
Three Prime Flanking Region: 
GGAGAACATGATGTTGTTTTCGTATTATAGTCT
SNP: 
C/T