MK004776 K2220

Resource Type: 
Genetic Marker
Name: 
MK004776 K2220
Identifier: 
MK004776_K2220
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004776 K2220, is adjacent to primer, K2220_X.
The genetic_marker, MK004776 K2220, is adjacent to primer, K2220_Y.
The genetic_marker, MK004776 K2220, is adjacent to primer, K2220_Common.
The genetic_marker, MK004776 K2220, is located in gene, DCAR_001020.
The genetic_marker, MK004776 K2220, is located in gene, LOC108204980.
The marker_locus, K2220, is an instance of genetic_marker, MK004776 K2220.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH126.251K2220MapViewer
2016 80592 NG full mapChr150.228K2220MapViewer
Synonyms: 
  • MK004776
Sequence Coordinates: 
DCARv2_Chr1:7442695..7442741+
View location in JBrowse: 
DCARv2_Chr1:7442695..7442741+
Sequence: 
TTGTATCAACCGGCTCATGCTGTTCAACAGGATTCACRTCTGGACTCTTT
GAGTGGTGATTCTTTTCATCT
Sequences: 
>MK004776_K2220 ID=MK004776_K2220; Name=MK004776 K2220; organism=Daucus carota; type=genetic_marker
TTGTATCAACCGGCTCATGCTGTTCAACAGGATTCACRTCTGGACTCTTT
GAGTGGTGATTCTTTTCATCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTGTATCAACCGGCTCATGCTGTTCAACAGGATTCAC
Three Prime Flanking Region: 
TCTGGACTCTTTGAGTGGTGATTCTTTTCATCT
SNP: 
A/G