MK004778 K2222

Resource Type: 
Genetic Marker
Name: 
MK004778 K2222
Identifier: 
MK004778_K2222
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004778 K2222, is adjacent to primer, K2222_X.
The genetic_marker, MK004778 K2222, is adjacent to primer, K2222_Y.
The genetic_marker, MK004778 K2222, is adjacent to primer, K2222_Common.
The genetic_marker, MK004778 K2222, is located in gene, DCAR_022669.
The genetic_marker, MK004778 K2222, is located in gene, LOC108227505.
The marker_locus, K2222, is an instance of genetic_marker, MK004778 K2222.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH649.046K2222MapViewer
2016 Integ NG bin mapCH645.441K2222MapViewer
2016 70796 NG full mapChr643.257K2222MapViewer
2016 70796 NG bin mapChr643.257K2222MapViewer
Synonyms: 
  • MK004778
Sequence Coordinates: 
DCARv2_Chr6:8976338..8976387+
View location in JBrowse: 
DCARv2_Chr6:8976338..8976387+
Sequence: 
TCACCTCCAACACCTCCCACTCCAGCCTCTGAATATCRCCAATACTCAAC
TTCTCAATTCCTAATCTCCGA
Sequences: 
>MK004778_K2222 ID=MK004778_K2222; Name=MK004778 K2222; organism=Daucus carota; type=genetic_marker
TCACCTCCAACACCTCCCACTCCAGCCTCTGAATATCRCCAATACTCAAC
TTCTCAATTCCTAATCTCCGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCACCTCCAACACCTCCCACTCCAGCCTCTGAATATC
Three Prime Flanking Region: 
CCAATACTCAACTTCTCAATTCCTAATCTCCGA
SNP: 
A/G