MK004780 K2224

Resource Type: 
Genetic Marker
Name: 
MK004780 K2224
Identifier: 
MK004780_K2224
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004780 K2224, is adjacent to primer, K2224_X.
The genetic_marker, MK004780 K2224, is adjacent to primer, K2224_Y.
The genetic_marker, MK004780 K2224, is adjacent to primer, K2224_Common.
The genetic_marker, MK004780 K2224, is located in gene, DCAR_021844.
The genetic_marker, MK004780 K2224, is located in gene, LOC108192979.
The marker_locus, K2224, is an instance of genetic_marker, MK004780 K2224.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH655.286K2224MapViewer
2016 70796 NG full mapChr649.664K2224MapViewer
Synonyms: 
  • MK004780
Sequence Coordinates: 
DCARv2_Chr6:19270710..19270760+
View location in JBrowse: 
DCARv2_Chr6:19270710..19270760+
Sequence: 
TCCATCTTCCKCAGCAACATTAGGCATTAATGGTAACYTTTGCCACCTTT
TAGAATGTGGGTCTAAGGCAA
Sequences: 
>MK004780_K2224 ID=MK004780_K2224; Name=MK004780 K2224; organism=Daucus carota; type=genetic_marker
TCCATCTTCCKCAGCAACATTAGGCATTAATGGTAACYTTTGCCACCTTT
TAGAATGTGGGTCTAAGGCAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCCATCTTCCKCAGCAACATTAGGCATTAATGGTAAC
Three Prime Flanking Region: 
TTTGCCACCTTTTAGAATGTGGGTCTAAGGCAA
SNP: 
C/T