MK004816 K2260

Resource Type: 
Genetic Marker
Name: 
MK004816 K2260
Identifier: 
MK004816_K2260
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004816 K2260, is adjacent to primer, K2260_X.
The genetic_marker, MK004816 K2260, is adjacent to primer, K2260_Y.
The genetic_marker, MK004816 K2260, is adjacent to primer, K2260_Common.
The genetic_marker, MK004816 K2260, is located in gene, DCAR_026982.
The genetic_marker, MK004816 K2260, is located in gene, LOC108199276.
The marker_locus, K2260, is an instance of genetic_marker, MK004816 K2260.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH855.739K2260MapViewer
2016 70796 NG full mapChr810.451K2260MapViewer
Synonyms: 
  • MK004816
Sequence Coordinates: 
DCARv2_Chr8:27003943..27003998-
View location in JBrowse: 
DCARv2_Chr8:27003943..27003998-
Sequence: 
CAKGGAAAGCCAATAACCACTCTACAATATCCTTTATYTGAACTTCAGTT
GGGGTCACGCCTAATGGACAG
Sequences: 
>MK004816_K2260 ID=MK004816_K2260; Name=MK004816 K2260; organism=Daucus carota; type=genetic_marker
CAKGGAAAGCCAATAACCACTCTACAATATCCTTTATYTGAACTTCAGTT
GGGGTCACGCCTAATGGACAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CAKGGAAAGCCAATAACCACTCTACAATATCCTTTAT
Three Prime Flanking Region: 
TGAACTTCAGTTGGGGTCACGCCTAATGGACAG
SNP: 
C/T