MK004900 K2344

Resource Type: 
Genetic Marker
Name: 
MK004900 K2344
Identifier: 
MK004900_K2344
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004900 K2344, is adjacent to primer, K2344_X.
The genetic_marker, MK004900 K2344, is adjacent to primer, K2344_Y.
The genetic_marker, MK004900 K2344, is adjacent to primer, K2344_Common.
The genetic_marker, MK004900 K2344, is located in gene, DCAR_022950.
The genetic_marker, MK004900 K2344, is located in gene, LOC108224394.
The marker_locus, K2344, is an instance of genetic_marker, MK004900 K2344.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH616.155K2344MapViewer
2016 70796 NG bin mapChr65.014K2344MapViewer
2016 Integ NG full mapCH617.381K2344MapViewer
2016 70796 NG full mapChr65.014K2344MapViewer
Synonyms: 
  • MK004900
Sequence Coordinates: 
DCARv2_Chr6:3384397..3384449+
View location in JBrowse: 
DCARv2_Chr6:3384397..3384449+
Sequence: 
TCGCATATGTAAGTCCTGCACACGCATCCACAAAATCYTCTTGTATGAAA
TCAGTGGAAAAGATCTGCAAC
Sequences: 
>MK004900_K2344 ID=MK004900_K2344; Name=MK004900 K2344; organism=Daucus carota; type=genetic_marker
TCGCATATGTAAGTCCTGCACACGCATCCACAAAATCYTCTTGTATGAAA
TCAGTGGAAAAGATCTGCAAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCGCATATGTAAGTCCTGCACACGCATCCACAAAATC
Three Prime Flanking Region: 
TCTTGTATGAAATCAGTGGAAAAGATCTGCAAC
SNP: 
C/T